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Department of Anatomy and Neurobiology. Washington University School of Medicine, St. Louis, Missouri
Submitted 13 February 2008; accepted in final form 18 May 2008
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ABSTRACT |
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INTRODUCTION |
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In awake performing animals, single-cell recordings are for the most part inconsistent and contradictory in supporting the periodic clock hypothesis. Only in studies of Lang et al. (1999)
was there occasional periodic IO discharge during rest periods in awake rats. S. S. Smith (1998)
noted task-related periodic Purkinje cell CS activity in awake walking rats but no such periodic discharge during rest periods. Keating and Thach (1995
, 1997
) noted "no clock-like activity" in the CS output of Purkinje cells in monkeys performing nonperiodic tasks. What is the frequency of complex spikes during behavior? Does this frequency change over time or is it fixed? Is periodicity (when observed) transient or persistent? Is the phase of the periodicity time locked to a task or to a universal clock signal? None of the mentioned studies that claim existence of IO periodicity provide statistics on the characteristics of these periodicities. We addressed these questions with a variety of new quantitative and statistical analyses to characterize complex spike firing during normal behavior in awake trained macaques. We found no periodicity as such during these conditions.
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METHODS |
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Surgical and experimental procedures were in accordance with National Institutes of Health and U. S. Department of Agriculture guidelines and were approved by the Animal Studies Committee at Washington University School of Medicine. The experiments were originally designed for studies of visuo-motor adaptation and learning tasks and took place in three different experiments conducted by three different experimenters (authors BG, SN, and JK). The data presented here are from the same animals for which data were presented in the previous reports. We retrospectively looked back at the database of all such recordings and identified any continuous recording that had available CSs, irrespective of the animal performance on the tasks. The spike times were then exported to text files for further analysis.
Three rhesus monkeys (A, B, and C) were trained on one of two different types of visuo-motor response tasks: tasks 1 or 2. In task 1 (previously described in Greger et al. 2004
), during each trial, the animal (monkey A or B) was visually cued to make a rapid natural reach movement from an initial hold position (with both hands on the handles of our apparatus) to a visual target and to return immediately to the original on-hold hands-on-apparatus position before being rewarded. In task 2 (previously described in Keating and Thach 1995
), the animal (monkey C) was trained to track a visual target on a screen using flexion extension wrist movements. Several weeks prior to any recording, each monkey was fitted (under full anesthesia) with a recording chamber and head bolts. Each recording included many individual trials under different visuo-motor adaptation paradigms described previously (see also Norris 2004
) as well as the intervening non-task-related periods; all were recorded in a continuous fashion. The time intervals were randomized between the start of consecutive trials, movement prompts, and reward delivery as previously described. The tasks therefore contained no inherent periodicity. Some of the data from monkey C (task 2) were previously included in a subset of recordings published by Keating and Thach (1995)
. Here we only used recordings that were made continuously (not from concatenated segments as previously reported).
Animal data collection
Single-unit recordings were made stereo-tactically from the right lateral cerebellar lobe of the monkeys in a head-restrained system. Each cell was individually identified and monitored throughout each recording session based on the shape of simple and CS wave forms as viewed on an oscilloscope (see Greger et al. 2004
; Norris et al. 2004
).
In task 1, the signals from the electrodes were amplified, filtered, and digitally recorded for local off-line analysis. The digitally recorded waveforms were converted to spike time points by template matching (performed by independent runs for simple spikes and CSs) using Cambridge Electronic Design's Spike2 software. In task 2, the CSs were identified using window filtering before the spike times were digitally recorded using Spike2 software. For all recordings, the spike times and the experimental parameters were stored on digital storage media. Additionally, for many of the recordings in task 1, the digitized high-resolution full electrical potential wave-forms were also stored for subsequent verification. We were concerned that the isolation of action potentials might vary across time. To be certain that potential variations in isolation did not bias our results and conclusions, we analyzed all units that were digitally marked in different ways (see Fig. 1), classified them into types I–VI (see Table 1) and compared the results. In sum, potential variability in isolation did not support exceptions to the main conclusions.
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For each recording, we calculated the recording length, total spike count, mean, median, maximum and minimum interspike intervals, and instantaneous firing rates. We then plotted the instantaneous firing rates and interspike intervals as a function of time (firing rate profiles). Additionally, we produced interspike interval histograms and instantaneous firing rate histograms for each recording. These basic statistics were used for verification of spike events, comparisons of event profiles, and evaluation of the fidelity of recordings across time.
Autocorrelogram analysis
One-sided spike time autocorrelograms of individual spike trains were computed using custom software with 5-ms binning intervals and 1,024 bins (up to just over a 5-s time lag). Zero time lag (self-spike interaction) peaks were not included. The binning was done with respect to each reference spike time after the autocorrelogram function was calculated (the data were not prebinned) to minimize a prebinning artifact. Note that the selected 5-ms bin size is smaller than the 7 ms expected duration of a CS. The autocorrelogram computations were verified using data with known autocorrelogram peaks and by comparison with the Spike2 software's built-in autocorrelogram function. For comparison and reporting purposes, we normalized (scaled) the y axis of the autocorrelograms by dividing each autocorrelogram by its corresponding recording length and scaled the autocorrelograms by one over the bin size (1/0.005 s.). The x axis was not scaled. Fast Fourier transform (FFT) of each cell's autocorrelogram was calculated and the results were verified using data with known frequency and using FFT functions from other commercial software packages.
Time-frequency spectral analysis (Gabor transform)
The Gabor transform (Bastiaans 1981
; Gabor 1946
) characterizes the power spectrum of a signal as a function of time. It is similar to applying a Fourier transform repeatedly to sequential fixed length segments of data. However, because it is done in the complex domain (accounting both for amplitude and phase), it accounts for phase and history of spike occurrences. More precisely, the Gabor transform is a time-dependent Gaussian windowing procedure (wavelet) applied to the Fourier transform that results in fixed interval and slightly overlapping wavelets. It transforms the signal recorded in the time domain into smaller fixed-size time segments. Then it performs a frequency spectral analysis at each time segment interval while preserving signal phase characteristics with respect to an absolute recording time. It is defined by the equation
![]() | (1) |
T segments at Tk intervals, and the entire frequency spectrum is broken into N many equal 
segments at
n intervals. The constant c is a scaling constant. The parameters
T and 
are inversely related to one another by the relationship: 
= 2·
/
T. The discretized version of this equation when each spike event is treated as a Dirac delta function at time tj results in
![]() | (2) |
In contrast to the Gabor transform, the complete Fourier transform fully projects a time-dependent signal into the frequency domain at a frequency resolution related to the total recording length. Instead of projecting a signal from time domain into frequency domain en block, the Gabor transform (as in Eqs. 1 and 2) breaks the signal into conjoint time-frequency segments at fixed step sizes of
T and 
intervals. The time-dependent information is at the cost of frequency resolution by a factor of k = Ttotal/
T. Other wavelet based methods use related techniques for breaking up a data set into conjoint time frequency segments using different windowing methods and/or various time and/or frequency sampling periods (e.g., using a variable step size
T and proportionately sizing 
).
We used custom software for performing the analysis described by Eq. 2 and verified our analysis using data with known frequencies (neural and simulations). The theoretical upper frequency limit (Nyquist limit) for these neural recordings is not particularly meaningful. The actual time resolution of the electrical waveforms from which spike times were calculated was >10 kHz. Because CSs seem to have a mean interspike interval of
1 s and an average action-potential duration of 7 ms, the higher end of our frequency spectrum has little practical meaning. Nevertheless we included frequency spectrum data
100 Hz for demonstration purposes (this will become clear in the following text). We computed the results using a 5.0-s sampling interval in one trial (
T = 5 s., 
= 0.2 Hz) as well as a 2.0-s sampling interval (
T = 2 s., 
= 0.5 Hz) on a second run (i.e., the spectrum data were calculated for each 2.0- or 5.0-s block of data at each 2.0- or 5.0-s intervals). These window size choices were based on the low firing rates of CSs (with mean interspike time difference of 1 to 2 s), which require larger windows to capture any periodicity in a meaningful way, the use of autocorrelograms in our analysis to adequately explore the local temporal features of our signal at intervals <5.0 s, and our interest in exploring frequency properties of the signal within the 10-Hz range with a frequency resolution of <1.0 Hz in keeping with previous reports.
The result of the Gabor transform calculated in this way is a series of complex numbers as a function of frequency at each sampled time point. Therefore for each conjoint time-frequency data point, we have both spectral amplitude as well as phase. We could therefore further analyze the signal in various ways looking at time-frequency distribution or even evolution of the signal.
For our data, the sparseness of CS events, even within the larger 5.0-s time window, made any conjoint three-dimensional time-frequency spectral analysis plots of the signal meaningless. Across time, the power fluctuated too much and, per 5.0-s epoch, usually remained around noise levels. In other words there were many 5-s windows where only one or two spike events occurred in them as would be expected from a natural Poisson process with a 1-spike/s mean event rate.
In the frequency domain, there are different ways of summarizing, across time the power-spectrum distribution of the signal. One way is to look at the mean power distribution in each of the Gabor transform sampling time windows, using averaging to make-up for the weak signal amplitude. Thus we calculated a per-time-segment or per-epoch power spectrum as a function of the sampling time (ignoring the phase). We then looked at the average per epoch power spectrum across the entire duration of each recording. We calculated this value and called it the ISUM (for independent sums). Note that ISUM signals that have different phases across different epochs, such as transient periodicities of weak amplitude, will be quite noticeable.
Another way of summarizing the power distribution is to look at the distribution of power in the entire recording en block, much the same way as a complete Fourier transform of the signal would. We achieved this more efficiently (albeit at a frequency resolution cost) by summing the complex Gabor transform terms for each frequency across time. We converted this value to the amplitude of the power terms. Finally, this power distribution was normalized for the total recording length by dividing the power over time. We called this the CSUM (for complex sum). Note that in CSUM, unlike ISUM, signals that have the same frequency but different phases across epochs will largely cancel each other out.
For each of our recordings we calculated the ISUM and CSUM for both sizes of sampling windows of 2.0 and 5.0 s. Note that ISUM is sensitive to recurring weak periodicities of various phases, such as one would expect from a particular task dependent periodic signal generator. Alternatively, the CSUM is sensitive to weak periodicities with a fixed phase such as one would expect from a true clock.
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RESULTS |
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Figure 1 represents the digital marking of the analog wave forms of complex and simple spikes (A and B) and possible artifacts (C–E), and Table 1 summarizes the classification scheme of these marked recordings. Figure 2, H–M, shows the autocorrelograms of individual recordings thus marked and classified. Figure 3 depicts one representative recording and the steps in its analysis. We isolated CS data from a total of 167 Purkinje cells. In the first section in the following text, we present the temporal characteristics of CSs. Most of this analysis is focused on the examination of inter-spike intervals and autocorrelation of CSs. In the second section, we present the spectral characteristics of the same recordings. Using the various analyses we were unable to detect periodicity in any one of the recorded neurons.
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Some notable trends emerged among each of the recording type classes. Recordings of the cells with best signal isolation (Fig. 1, A–C) as well as the group average demonstrated a mean autocorrelogram per bin spike count of 0.5 and a relative refractory period of 100 ms before the first recorded autocorrelogram spike. After the 100 ms lack of autocorrelogram peak activity, the remainder of each autocorrelogram was quite uniform, even
5 s.
We had anticipated these autocorrelographic findings (the 100-ms early trough and the lack of periodicity) from the interspike interval (ISI) histograms and the instantaneous firing rate histograms of our spike data.
Analysis of differences among CS temporal firing profiles
Because we had the digitized single-unit recording waveforms of full recorded electrical events for many of our cells, we could go back and look for the sources of the early bin events in the autocorrelograms and ISI distribution profile for various cells belonging to various classification types. For every available case, we looked back at the raw electrical waveform for every pair of spikes with an ISI interval of <20 ms. We also reviewed a sampling of recorded CSs from those cells judged best isolated (Fig. 1, A–C). In total, we identified >3,500 such short-latency repeat spike events among 35 recordings (representing 4.5% of all complex spikes in those 35 representative recordings). Figure 1 shows several such examples, along with examples of higher quality simple and complex spikes. In this analysis, every repeat spike event marking in a pair that occurred at a time of <10 ms reflected an erroneous double marking of the normal oscillations within the same CS waveform (for example Fig. 1D) or a simple spike preceding a CS and marked as a earlier CS (Fig. 1C).
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We computed FFT of each individual autocorrelogram (Fig. 4). For comparison across recordings, each cell's FFT power spectrum was converted to a log scale and normalized on a z-scale (number of SDs from the mean log power above DC term with respect to its own log power mean and SD excluding DC). Figure 4A shows the complete normalized power spectrums from all the cells in our recordings plotted on a z scale. Figure 4B shows the per frequency distribution of 95% of z-score values and the outliers, comparing the z scores among all recordings. As can be seen in the figures, depending on the classification type, most of the power in these recordings is localized to the DC portion, or in a continuum from the DC portion into low frequency regions. The power spectra appear uniform and without any dominant frequency terms across most of the recordings.
Spectral analysis via Gabor transforms
While the autocorrelograms looked at recurrent fixed interval relationships among the spikes in a spike train, the Gabor transform data allowed the analysis of the frequency components across time (Fig. 5). Again, these results are summarized in different ways looking for recurrent periodicities of various phases (via ISUM) or recurrent periodicities of fixed phase (via CSUM) for different time windows. For each cell, we had four summarized Gabor spectral plots: the ISUM and CSUM, each calculated once at 2.0- and once at 5.0-s time windows. For comparison across cells, we normalized the power spectra from individual recordings in a manner similar to that used above when normalizing autocorrelogram FFT on a log-power z scale. This normalized the peak-by-peak variability of each power-spectrum plot to its own overall variability and baseline power. We then compared all the normalized power spectra by looking at the distribution of spectral peaks at each frequency point from among all recordings. Figure 5 summarizes these results. Similar to the autocorrelogram FFT plots, the only notable peaks occur at 60 Hz and for the ISUM plot at 75 Hz.
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DISCUSSION |
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Our data contrast with other reports mentioned in the introduction that have noted persistent or rest period periodic IO discharges. The study by S. S. Smith (1998)
is also consistent with our data, showing no periodic IO discharge during rest periods. Additionally, during the Smith stepping task, the frequency of IO discharge depended on the task. This task-dependent change in IO activity is consistent with other published results (Kim et al. 1987
; Lamarre and Puil 1974
).
The physical explanation for the 10- to 12-Hz periodicity that many authors have observed thus in our view remains open and conjectural. Many published results hint at the fact that a 10-Hz IO discharge is not a preferred discharge frequency of these neurons but rather their maximal saturated frequency response. Armstrong and Rawson (1979)
, recording in awake but inactive cats, reported occasional high-frequency bursts of "as many as eight [CSs] in 1 s," but these high rates only lasted 1–2 s and "autocorrelograms revealed no longer term regularity or rhythmicity." Gellman et al. (1985) noted only rare 10-Hz discharge rates from sensory provoked IO neurons: "olivary cells generally responded only to the transient phase of a stimulus. Thus repeated stimulation evoked repeated responses provided that the 100-ms refractory period was respected." These reports suggest then that a 10- to 12-Hz periodicity may be the maximal firing rates of these neurons. The corresponding 80- to 100-ms refractory period is notable in our data and data published by numerous other authors (Keating and Thach 1995
; Lang et al. 1997
, 1999
; Llinas and Sasaki 1989
; Llinas and Volkind 1987
; Sasaki et al. 1989
), where its duration seems to be closer to 80 ms in some anesthetized preparations. In our data, we clearly observe a 100-ms refractory period in type I cells, but also note it in type II, III, and VI cells as well.
It may be that the 10-Hz firing response rates of these neurons is reflective of the saturation kinetics of the IO neurons with a 100-ms refractory period. The idea that reaching saturation kinetics of a neuron based on its refractory period may lead to false periodicity in autocorrelograms is not new (Bar-Gad et al. 2001
). An additional piece of evidence supporting this hypothesis is in observations by Llinas and Sasaki (1989)
. The preparation they used included anesthetized rats that were further treated with Harmaline, a known producer of IO rhythmicity. When these presumably maximally driven cells (under nonphysiological circumstances) were further stimulated, they could only produce further spikes in phase with the stimulation. More interestingly, stimulations out of phase with the rhythmic patterns of these neurons delayed the onset of the next rhythmic burst pattern. This suggests that stimulations during the refractory periods prolonged the refractory periods even further, preventing further spike occurrence. Thus one may expect 10- to 12-Hz IO periodicity during periods of increased overall stimulation and firing.
A candidate driving IO 10-Hz periodicity may be extrinsic inputs that either push IO to its maximal firing because of a 100-ms refractory period or are inherently from periodic sources such as a rhythmically firing thalamus. The two main inputs to IO include an excitatory pathway via mesendiancephalic region and an inhibitory input via deep cerebellar nuclei. Ruigork and Voogd (1995)
demonstrated that stimulation at the mesendiancephalic junction produces, first, a short-latency action potential in IO, followed—in >50% of cases—by a second, long-latency action potential at a delay of between 120 and 300 ms. Although a 100-ms refractory period may explain the significant delay in the occurrence of the second spike, it does not explain why it occurs long after the input has been withdrawn. Furthermore, Lang (2001)
reported that obstruction of this excitatory pathway via local blockade of glutamatergic synaptic transmission in IO paradoxically enhanced IO periodicity, while, not unexpectedly, reducing its overall firing rate. In another paper, Lang et al. (1996)
reported that blockade of cerebellar nuclear originated GABAergic input increased the firing rate of these neurons while also enhancing their periodicity but at a lower frequency of 5–6 Hz. While these observations hint that periodicity of IO membrane potential is at least partly an inherently local intrinsic phenomenon, a simultaneous double blockade experiment (for both excitatory and inhibitory pathways) has not been reported.
Moreover, a 100-ms refractory period does not explain the lower (5–6 Hz) discharge frequencies. Llinas and Yarom (1981)
concluded that IO oscillations are due to intrinsic conductance or connectivity (via gap junctions) of IO neurons. They later (Llinas and Yarom 1986
) demonstrated the propensity of IO neurons to oscillate at two different frequency regions, one driven by depolarizing currents at a lower frequency of
6 Hz and another driven by hyper-polarizing currents at a frequency of
10–12 Hz. They concluded that IO oscillatory behavior was due to local ionic conductance and local gap junctions, which allowed the periodicity to persist and even be quantized into local domains. Welsh and Llinas (1997)
suggested this was a "pace-making" signal for activating synergistic muscle groups. Smith (1998)
also concluded that the task-dependent periodicity of IO is, in fact, the evidence for the role of this pace maker in timed motor behavior. The term pace-maker, even more than the term clock, suggests that in the view of these authors, IO periodicity is akin to cardiac pace-maker cells in the sino-atrial node, although with two preferred frequencies. Therefore one should expect to find either a preferred modulated frequency of these neurons, such as in the range of the two frequency regimes found by Llinas and Yarom (1986)
, or a select un-modulated, fixed, preferred frequency during normal physiological function of IO (as would be necessary for coupled oscillator models). We, however, see no evidence of IO output periodicity in our data that would support either of these two conclusions, even at the lower 5- to 6-Hz frequency range.
The 80- to 100-ms refractory period between IO-generated CSs may reflect some interesting dynamics of the olivo-cerebellar circuit. The time window of cerebellar LTD appears to be most significant within 0–100 ms between parallel fiber activity and the occurrence of a complex spike (Karachot et al. 1994
). Learning of timing in rabbit eye-blink conditional response (presumably via the same circuitry) also only takes place up to a 100-ms interstimulus delay (Schneiderman and Gormezano 1964
; Smith et al. 1969
). A 150-ms lag appears to exist between increased simple spike activity and before the arrival of a complex spike (Miall et al. 1998
). It is as though the circuit is built to inherently avoid producing a second spike after the occurrence of an IO generated spike to avoid interference with the time window for plasticity. Such a system may require intrinsic memory of 100 ms to keep account of any important signals that arrive while it is in a refractory cycle. The late activated long latency action potential that Ruigork and Voogd (1995)
observed in IO might be the signature of this intrinsic memory mechanism. In fact, the more curious question is how this system avoids oscillations despite its strong substrate for doing so? Similar arguments can be extended to synchrony as well. Note, if multiple IO units fired synchronously, large areas of the cerebellar cortex and nuclei (which incidentally would be most related to the task being executed) would become nonfunctional at once. Recent computational work suggests that olivary gap junctions may synchronize the input rather than the neuronal output, limiting the potential IO influence on synchronizing complex spike activity (Kistler and De Zeeuw 2005
). This circuit may therefore have an intrinsic need to be de-synchronized, rather than synchronized, and to avoid oscillations to remain functional. Indeed Schweighofer et al. (1999)
used a modeling paradigm to demonstrate that cerebellar gap junctions may indeed de-synchronize IO neurons. A timing device may still be at work but as a 100-ms time keeper built to avoid dysfunctional performance or learning.
What we conclude from these data is that under the normal physiological conditions of awake animals performing nonperiodic tasks, IO firing is not periodic. This may not necessarily preclude IO from having transient task-related periodicities such as during maximal firing response or during periodic tasks (such as in walking, Smith 1998
). We draw this conclusion despite other observations that IO neurons in vitro appear to have at least a potential to oscillate at two preferred frequencies of 5–6 and 10–12 Hz. These in vitro oscillations do not have a clear functional significance, and future work is necessary to understand these nonphysiologic properties of the IO.
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GRANTS |
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FOOTNOTES |
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Address for reprint requests and other correspondence: W. T. Thach, Dept. of Anatomy and Neurobiology, Washington University School of Medicine, Box 8108, 660 S. Euclid Ave., St. Louis, MO 63110 (E-mail: thachw{at}pcg.wustl.edu)
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